2014 Synthetic Biology: Engineering, Evolution & Design (SEED)

Session: Poster Session

Presentations

Controlled Gene Amplification Enables High, Stable, Selection Free Gene Expression in Saccharomyces Cerevisiae
Christina S. Nødvig, Line D. Buron, Tomas Strucko, Zofia Jarczynska, Louise Mølgård, Uffe H. Mortensen
High-Throughput Crispri Studies of Gene Function and Regulation in E. coli
Harneet S. Rishi, Esteban Toro, David Chen, Guillaume Cambray, Xiaowo Wang, Honglei Liu, Lei S. Qi, Adam P. Arkin
Directed Evolution of Far-Red Fluorescent Rhodopsins
R. Scott McIsaac, Frances H. Arnold, Martin Engqvist, Lukas Herwig, Timothy Wannier
The Layered Analysis and Control of Biochemical Reaction Networks
Thomas P. Prescott, Antonis Papachristodoulou
Bottom-up Construction of Orthogonal Regulation for Gene Circuits Using Transcription Factor-Promoter Pairs with Predictable Properties
Benjamin A Blount, Tom Ellis
Ultra-High-Throughput Screening of Enzyme Libraries with Droplet-Based Microfluidics
Exploiting Anaerobic Gut Fungi for Lignocellulose Breakdown and Enzyme Discovery
Kevin V. Solomon, John K. Henske
Construction and Characterization of Synthetic Dual-Input Promoters
Ian Roney, Mads Kærn
Synthetic Biology with a Cell-Free TX-TL System: Metabolism, Gene Circuits, Phages and Artificial Cell
Jonghyeon Shin, Filippo Caschera
Highly Modular “Bow-Tie” Gene Circuits with Programmable Dynamic Behavior
Laura Prochazka, Bartolomeo Angelici, Benjamin Häfliger
Spider Dragline Silk Inspired Man-Made Fibers with Unique Property
William Marcotte, Congyue Peng, Julia Russo, Charlene Gravgaard, Heather McCartney, William Gaines
Enhanced Gene Disruption at Specific Promoter Region By Simultaneous Digestion of ZFN or Crispr/Cas System
Wataru Nomura, Akemi Masuda, Hirokazu Tamamura
Tunable and Multifunctional Eukaryotic Transcription Factors Based on Crispr/Cas
Fahim Farzadfard
Near-Perfect Digital Switching in a Synthetic Biosensor Circuit Achieved through Temporal Control of Circuit's Genetic Makeup
Nicolas Lapique
Characterizing and Alleviating Substrate Limitations for Improved in Vitro Ribosome Construction
Michael C. Jewett
Parasight V1.0 – a Synthetic Biology Approach for the Detection of Parasites
Alexander J. Webb, Richard Kelwick, Ciaran McKeown, Kirsten Jensen, Nicolas Kylilis, Geoff S. Baldwin, Tom Ellis, Paul S. Freemont
Bioprospecting for Genes That Confer Biofuel Tolerance Using a Genomic Library Approach
Timothy Tomko, Mary Dunlop
An in silico Knowledge-Base for Crispr-Mediated Cell Engineering
Sridhar Ranganathan, Namritha Ravinder, Jon Chesnut, Kevin Clancy
Sensitivity of Synthetic Biological Circuits to Environmental Conditions
Naveen Venayak
Sensitive detection of proteasomal degradation using orthogonal gene circuits
Yimeng Zeng
A Highly Tunable System for the Simultaneous Expression of Multiple Enzymes in Saccharomyces Cerevisiae
Takashi Matsuyama, Yoichiro Ito, Mamoru Yamanishi
Genetic Reporter Systems for Understanding the MAR operon in Escherichia Coli
Nicholas A. Rossi
Rapid Evaluation of Itaconic Acid Production Strategies in Saccharomyces Cerevisiae
Ben Meijerinck, Rob van der Hoeven
Genome Wide Manipulation of Transcription by CRISPR-Cas9 Transcription Factors in Saccharomyces cerevisiae
Justin Smith, Ulrich Schlecht, Sundari Suresh, Ana Maria Aparicio, Lars M. Steinmetz, Ron W. Davis, Leopold Parts, Robert P. St Onge
Engineering and Understanding Enzyme and Pathway Localization to ER and Lipid Droplet Membranes
Systematic comparison of enzymatic error correction methods using deep sequencing
Di Zhang, Nathan B. Lubock, George M. Church
Model-Driven Engineering of Gene Expression from RNA Replicons
Jacob Beal, Tyler Wagner, Tasuku Kitada, Odisse Azizgolshani, Jordan Moberg Parker, Douglas Densmore, Ron Weiss
Engineering Yeast as a Host for Modular Polyketide Production
Dmitriy Kolesnikov, Robert P. St Onge
Extrinsic Noise and Low-Level Pulsing Orchestrate Bet-Hedging Responses
Javier Garcia-Bernardo, Mary Dunlop
Modulation of gene expression via directed electrical signaling; voltage sensitive promoters
Yousef Okasheh, Nicholas M. Marshall, Ross McBee
Using a Biosensor Controlled Genetic Feedback Loop to Improve Microbial Biofuel Tolerance
Jessica Lindle, Mary Dunlop
Marinobacter Aquaeolei VT8 As a Model for the Production of High-Value Neutral Lipids in Bacteria
Brett M. Barney
Novel Combinations of Efflux Pumps Improve Fitness Landscape of E. coli Under Biofuel Stress
William Turner, Mary Dunlop
Crystal Structure of the E. coli AcpP=FabB Complex
David Jackson
Engineering Cellulose-Degrading Complexes from Anaerobic Gut Fungi
Kevin V. Solomon
Engineering Regulation in Anaerobic Fungi during Lignocellulose Breakdown
John Henske
Combinatorial Assembly of Large Biochemical Pathways into Yeast Chromosomes for Improved Production of Value-Added Compounds
Models of the Cell for Synthetic Gene Circuits Design
Prem Kumar Jayaraman
A Genetically-Structured Deterministic Chemical Kinetic Simulation of the Life Cycle of the Biotechnologically Important Filamentous Bacteriophage M13
John Fisk, Steven Smeal