2017 Synthetic Biology: Engineering, Evolution & Design (SEED)

Session: Confirmed Posters

Presentations

Cloning, Expression and Characterization of a Self-Sufficient Cytochrome P450 Monooxygenase from Bacillus Species
Rimal, H., Dangi, B., Oh, T. J.
Computational Design of Self-Assembling Protein Nanomachines
Courbet, A., Wei, K., Nattermann, U., Moyer, A., Hsia, Y., Ueda, G., Fallas, J., Boyken, S., Chen, Z., Xu, C., Ceze, L., Daniel, T., Smith, J., Bradley, P., Baker, D., Ben-Sasson, A., Vulovic, I.
Quantitative Modeling of Integrase Dynamics Using a Novel Python Toolbox for Parameter Inference
Swaminathan, A., Hsiao, V., Murray, R. M.
Effects of Overexpressing Calvin-Bassham-Benson Cycle Genes in Synechocystis PCC 6803
Liang, F., Lindblad, P.
An Accelerated Evolution Approach to Produce Next Generation Yeast Strains for Protein Discovery and Production
Comyn, S., Mathieu, Y., Celedon, J., Brumer, H., Bohlmann, J., Tokuriki, N., Mayor, T.
Synthetic Biology Memory Circuits in Non-Traditional Hosts
Khan, N. E., Bernstein, H. C., Yeung, E., Bonheyo, G.
Exploiting a Soil Bacterium for the Sustainable Production of High-Value Lipids
Eltis, L. D., Roccor, R., Round, J.
Reprogramming Yeast Mating to Characterize Protein-Protein Interactions in High-Throughput
Younger, D., Berger, S., Baker, D., Klavins, E.
Engineering Insulation between Synthetic Bacterial Signaling Pathways
McClune, C., Laub, M., Voigt, C. A.
Mapping the Genomic Landscape of CRISPR-Cas9 Cleavage
Gradia, S.
Biodevisor: Automated Refactoring of Biosynthetic Gene Clusters
Oberortner, E., Deutsch, S., Hadjithomas, M.
Engineering Synthetic Proteins to Generate Ca2+ Signals in Mammalian Cells
Qudrat, A., Truong, K.
Innovative Technology to Produce the Building Blocks for Ambroxide
Park, G.
Functional Robustness of Synthetic Gene Circuits Under Mutation Pressure
Lee, J. Y., Kim, K. H.
Repressing Integrase Attachment Site Operation with CRISPR-Cas9 in E. coli
Shur, A., Murray, R. M.
Engineered Proteins Program Mammalian Cells to Target Tnf? Sources
Qudrat, A., Truong, K., Mosabbir, A.
A CRISPR/Cas9 Genome Engineering Toolbox for Systems Metabolic Engineering of Yeast
Verwaal, R., Buiting-Wiessenhaan, N., Vonk, B., Roubos, J. A.
Phoenix: A Systems Engineering Approach to Spatial and Temporal Pattern Synthesis in Genetic Systems
Madsen, C., Appleton, E., Vaidyanathan, P., Pacheco, A., Vasile, C. I., Haghighi, I., Mardian, R., Roehner, N., Belta, C., Densmore, D.
Improving Electron Transfer in Cytochrome C-Expressing Escherichia coli by Modulating Cytochrome C Maturation
Su, L., Ajo-Franklin, C., Baruch, M., Cornejoa, J., Fukushimaa, T.
Measurements of Translation Initiation from All 64 Codons in E. coli
Hecht, A., Glasgow, J., Jaschke, P., Bawazer, L. A., Munson, M. S., Cochran, J. R., Endy, D., Salit, M.
A Mechanism for Oscillations in Co-Repressive Microbial Consortia
Sadeghpour, M., Veliz-Cuba, A., Orosz, G., Josi?, K., Bennett, M. R.
Cas9 Activity in Human Chromatin: Inhibition and Strategies for Increased Efficiency
Daer, R., Haynes, K., Barrett, C.
Quantifying Noise Correlations in the Multiple Antibiotic Resistance (Mar) Network
El Meouche, I., Rossi, N. A., Dunlop, M. J.
Understanding and Manipulating Chromosomal-Scale DNA Looping in Escherichia coli
Hao, N., Shearwin, K. E., Dodd, I. B.
An Engineered Pyrrolysyl tRNA Synthetase for In Vivo Measurement of Sense Codon Reassignment in E. coli
Schwark, D., Schmitt, M. A., Fisk, J. D.
Engineering Microbial Utilization of Pectin-Rich Biomass for Producing Commodity Chemicals
Protzko, R., Dueber, J.
Engineering Whole Cell Biocatalysts for Consolidated Bioprocessing 
Ievdokymenko, K., Av-Shalom, T., Goertsen, D., Ocampo, J., Verstraete, M., Hallam, S. J., Smit, J. K.
Applying Synthetic Biology to Synthesize Functional Materials
Wallace, A., Voigt, C. A.
Dissecting the Factors That Determine the Fidelity of the Genetic Code through Sense Codon Reassignment
Fisk, J. D., Schmitt, M. A., Schwark, D.
An Automated Flow-Based/Digital Microfluidic Platform with on-Chip Optical Detection System for High-Throughput Gene Editing Processes
Iwai, K., Gach, P., Kim, P. W., Raje, M., Heinemann, J., A. Duncombe, T., Deng, K., Northen, T., Hillson, N. J., Adams, P. D., Singh, A. K.
Exploring the Evolution of Ahl Lactonases
Tokuriki, N., Williams-Yuen, J.
Naringenin-Responsive Riboswitch-Based Fluorescent Biosensor Module for Escherichia coli Co-Cultures
Xiu, Y., Jang, S., Jones, J. A., Linhardt, R. J., Yuan, Q., Koffas, M., Jung, G. Y., Zill, N. A.
Effective Miniaturization of Illumina Nextera XT Library Preparation for Small Whole Genome Sequencing By Utilizing the Labcyte Echo 525® Liquid Handler
Lai, J., Lesnick, J., Ruppert, N.
Monitoring Microbial Genetic Circuits in Soils Using Orthogonal Enzymes That Synthesize Volatile Metabolites
Silberg, J. J., Cheng, H. Y., Masiello, C. A., Del Valle, I., Huh, D.
Multiplex Gene Synthesis in Emulsions
Plesa, C., Kosuri, S., Lubock, N. B., Sidore, A., Church, G. M., Zhang, D.
Systems and Synthetic Biology of Rhodococcus Opacus to Enable Conversion of Lignin-Derived Aromatic Compounds into Lipids
Henson, W. R., DeLorenzo, D., Rottinghaus, A., Moon, T. S.
A Genetic Switch for Stable, Long-Term Fermentative Production of Anabolic Products in Yeast
Chua, P., Meadows, A., Jiang, H.
Bistable Switches for Yeast Population Growth Designed on Predictions from a Toolkit of Cell Division Regulators
Carignano, A., Adam, L., de Lange, O., Klavins, E.
Introducing Catalysis into Non-Catalytic Protein Folds: How Nature Does It
Kaczmarski, J., Clifton, B., Jackson, C. J., Carr, P., Tokuriki, N.
A Versatile Toolbox for the Control of Protein Levels Using N?-Acetyl-Lysine Dependent Amber Suppression
Volkwein, W., Maier, C., Krafczyk, R., Jung, K., Lassak, J.
RNA Regulators of Gene Expression for High-Throughput Strain Engineering
Glasscock, C. J., Lucks, J. B.
Rapid Identification and Quantitative Assessment of Plant Enhancers in Full-Genome Libraries
Dorrity, M. W.
Engineering Microbial Consortia Using Fosmid Pool Selection
Ievdokymenko, K., Hallam, S. J.
Directed Combinatorial Mutagenesis of Escherichia coli for Complex Phenotype Engineering
Gill, R. T., Choudhury, A., Beckham, G., Liu, R., Liang, L., Nogué, V. S. I., Garst, A.
High Quality, Error-Free DNA for Genome Engineering and Constructing Genetic Circuits for Cell-Free Systems
Steil, B. P., Eggenstein, E., Rouillard, J. M.
CRISPR NAND Gate: rescuing a cis-repressed gRNA using antisense sRNA
Harvey, P. J., Rosser, S. J.
A Quorum-Busting Approach to Microbiome Engineering
Treviño González, M. T., Morones, J. R., Sepúlveda Guzmán, S.
Mining the Human Microbiome: Natural Product Discovery from (meta)Genomic Data
Chang, F. Y., Clardy, J., Fischbach, M., Voigt, C. A.
Recent Breakthroughs in Enabling Technologies Platforms for Wheat
Kathiria, P., Diedhiou, J., Burton-Hughes, K., Randhawa, H., Marillia, E.
Mammalian Cells Seek CSF1 Sources Via Engineered Proteins
Qudrat, A., Truong, K.