2016 Synthetic Biology: Engineering, Evolution & Design (SEED)

Session: Accepted Posters

Presentations

Programming the Timing of Gene Expression in Synthetic Circuits
Mika Tei, Ophelia S. Venturelli, Adam P. Arkin
TNT-Cloning: A New Platform for Flexible and Universal Usage of DNA Parts
Henrique De Paoli
Bioengineering Magnetic Nanoparticles in Magnetotactic Bacteria
DNA Component Order Independence Using Insulated Bacterial Promoters
Swati Carr, Jacob Beal, Douglas Densmore
Engineered Probiotics for Cholera Treatment and Diagnosis
Ning Mao, D. Ewen Cameron, James J. Collins
Continuous Evolution of Proteases Using a T7 Bacteriophage System
Daniel Garry, Andrew Ellington
Transcription Analysis and Metabolite Profiling of the Terpenoid Indole Alkaloid Pathway in Engineered Catharanthus Roseus Hairy Root Lines
Chunyao Li, Sue Gibson, Christie Peebles, Jacqueline V. Shanks
A Novel Class of Programmable Hormone-Responsive Transcription Factors to Re-Engineer Plant-Environment Interactions
High-Efficiency, Multi-Copy, Markerless Integration of Large Biochemical Pathways in Saccharomyces Cerevisiae 
Youyun Liang, Shuobo Shi, Ee Lui Ang, Mingzi M. Zhang
An Engineered Open Cell Free Synthesis Platform for the Production of Non-natural Amino Acid Based Antibody-Drug Conjugates
Dan Groff
Non-Standard Amino Acid Incorporation Using a Ribosome with Tethered Subunits
Do Soon Kim, Erik D. Carlson, Michael C. Jewett, Jessica Perez, Anne d'Aquino
Incorporating Phenotype Data to Improve Parental Strain Flux Estimations
Matthew Long, Jennifer L. Reed
Rational Design of Large Crispr/dCas9 Transcriptional Logic Circuits in Eukaryotic Cells
Justin Vrana, Miles W. Gander, William Voje, Eric Klavins
Engineering Improved Bio-Jet Fuel Tolerance in Escherichia coli Using a Transgenic Library Approach
Timothy Tomko, Mary Dunlop
Retargeting a Dual-Acting sRNA for Multiple mRNA Transcript Regulation
David W. Wood
C1 Biorefinery By Designer Enzyme Complexes As Protein Synthesis Machinery on the Cell Surface of Ralstonia Eutropha
Jeong Eun Hyeon, Sang Kyu Shin, Young-Chul Joo, Da Woon Jeong, Sung Ok Han
Utilizing the Labcyte Echo® Liquid Handler and Gateway® Gene Assembly in the Generation and Transfection of a PTEN-GFP Construct into a PTEN Null PC-3 Cell Line
John Lesnick
Development of a Multiplexed Cadmium Biosensor for the Detection of Heavy Metals in the Environment
Lara Bereza-Malcolm, Gulay Mann, Sanja Aracic, Ashley Franks
Assembly of Membrane Encapsulated Nanoreactors
Joanna Komar, Natalie Di Bartolo, David Swainsbury, Mike Jones, Ian Collinson
Engineering a Synthetic Microbial Consortium for Efficient Production of Water Retaining Biopolymers via in-situ Precursor Production
Jeremy Minty, Drew Dunham, Samuel Kohley, Marc Singer, Xiaoxia Lin
Heuristic Design and Engineering of Synthetic Yeast Promoters
Arun S. Rajkumar, Guodong Liu, David B. Jullesson, Dushica Arsovska, Mette Kristensen, Michael Krogh Jensen
A Scalable Epitope Tagging Approach for High Throughput ChIP-Seq Analysis
Xiong Xiong, Huimin Zhao, Bing Ren, Jian Yan, Surbhi Jain
An Update on Synbis – the Synthetic Biology Information System
Matthieu A. Bultelle, Iñaki Sainz de Murieta, Richard I. Kitney
The JBEI Experiment Data Depot
William Morrell, Mark Forrer, Nathan J Hillson, Hector Garcia Martin, Garrett Birkel, Jason Eads
Engineering Thermostable Proteins to Selectively Extract Strategic Metals from Low Temperature Geothermal Brines
Marimikel Charrier, Caroline Ajo-Franklin
Leveraging Chemical Insights in Computational Identification of Interesting Biosynthetic Gene Clusters
Emmanuel L.C. de los Santos, Christophe Corre, Gregory L Challis
Design a Tunable Expression and Display System on Bacterial Spore Surface
Erin Drufva
Towards the First Data Acquisition Standard in Synthetic Biology
Iñaki Sainz de Murieta, Matthieu A. Bultelle, Richard I. Kitney
Electricity-Generating Microbial Communities in Biotrickling Filter-Microbial Fuel Cells for Gaseous Ethyl Acetate Treatment
Chi-Wen Lin, Chih-Hung Wu, Jing-Chen Shih
Non-Canonical Amino Acid Incorporation via Sense Codon Reassignment in E. coli
Wil Biddle, Margaret A. Schmitt, John D. (Nick) Fisk
Cell Free Synthesis of Protein Microcompartments
David Garcia
Mining Sugar Transporters from Gut Fungi for Improved Fuel & Energy Production
Kevin V. Solomon, Sean P. Gilmore, Susanna Seppala
Nanoparticle Delivery Biofactory Using E. coli as the Synthetic Host
Rupali Reddy Pasula, Sierin Lim
Tunable Thermal Bioswitches for Noninvasive Genetic Regulation
Mikhail Shapiro, Dan Piraner, Brittany Moser, Mohamad Abedi
Utilizing Sense Codon Reassignment to Understand the Plasticity of the E. coli Genetic Code
Margaret A. Schmitt, Wil Biddle, John D. (Nick) Fisk
Engineering an Escherichia coli Strain to Characterize Heme Metabolism
Manon Couture, Myriam Gagné, Sebastian Rey, Gabrielle Labrie
Metabolic Design Principles for Engineering Synthetic Microbial Communities
Orkun S. Soyer, Christian Zerfass
Catalytic Enhancement of Enzymatic Pathways on a Nanoparticle Surface
James Vranish, Igor Medintz, Scott Walper, Eunkeu Oh, Kimihiro Susumu
Minimum Flow Cytometry Calibration Information (MinFlowCal)
Jacob Beal, Peter McLean, Traci Haddock-Angelli, Brian Teague, Lili Wang, Matthew S. Munson, Sarah Munro, Marc Salit
A Tunable Bacterial Selection System for Engineering Condition-Dependent Protein Function
Katherine E. Brechun, Andrew Woolley, Katja Arndt
Enhancing Orthogonal Behavior and Amber Suppression Activity for Heterologous tRNA and tRNA Synthetase Variants
Andre Maranhao, Andrew Ellington, Ross Thyer
The Role of Single Occupancy Effects on Integrase Dynamics in a Cell-Free System
Georgios Artavanis, Victoria Hsiao
A Genetically Encoded Reporter for Diffusion Weighted Magnetic Resonance Imaging
Arnab Mukherjee, Mikhail Shapiro, Di Wu, Hunter Davis
An In Vivo mutation Prevention System
Alejandro Chavez
Noncanonical Amino Acid Addictions in Biological Systems
Drew S. Tack, Andrew D. Ellington, Ross Thyer, Jared Ellefson
High Resolution Expression Profiling of Bacterial Genomes
A Hacked 3D Printer Towards the Printing of Materials through Biological Organisms
Lina M. González, Alec Nielsen, Andrea Wallace
Characterizing RNA Thermometers through Shape-Seq
Commercial Expression Levels of a Potent Recombinant Antiviral Therapeutic Protein in Sugarcane
T. Erik Mirkov, Carmen S. Padilla, Mona B. Damaj, Joe Molina
Repurposing Ribosomes for Synthetic Biology: Ribo-T v2.0
Erik D. Carlson, Anne d'Aquino, Emily M. Fulk, Do Soon Kim, Michael C. Jewett