2nd International Conference on Microbiome Engineering (ICME 19)

Session: Poster Session

Presentations

Casper (CRISPR-Associated Software for Pathway Engineering and Research): A Versatile Tool for Harnessing CRISPR-Cas in Microbiome Engineering
Brian Mendoza, Cong Trinh
Development of Designer Probiotics for Targeted Delivery of Immunomodulatory Payloads
Jason Lynch
Resolving Signatures of Engineering in S. Cerevisiae and Nonconventional Yeasts with Whole Genome Sequencing
Eric Young, Joseph Collins
An Agent-Based Modelling Framework to Investigate the Role of Chlamydia Pneumoniae in Late-Onset Alzheimer’s
Tuning Microbial Diversity Using Temporal Structure in High-Throughput Continuous Culture
Ahmad S. Khalil, Christopher P. Mancuso, Jeff Gore, Clare Abreu, Hyunseok Lee
Transcriptome-Guided Parsimonious Flux Analysis Improves Predictions with Metabolic Networks in Complex Environments
Matthew Jenior, Thomas J. Moutinho, Jason Papin
High Order Bacterial Interactions Influence Activity of a Potential Bacteriotherapy Agent
Bernardo Cervantes
Microsplit: Single-Cell RNA-Sequencing Technology for Microbes
Anna Kuchina, Georg Seelig, Leandra Brettner, William DePaolo
Functional Anabolic Network Analysis of Human-Associated Lactobacillus Strains
Thomas J. Moutinho, Jason Papin, Benjamin C. Neubert, Matthew Jenior, Maureen A. Carey, Gregory L. Medlock, Glynis Kolling
Understanding the Dynamics of a Methanotroph-Cyanobacterium Coculture through Kinetic Modeling and Experimental Verification
Kiumars Badr, Matthew Hilliard, Nathan Roberts, Q. Peter He, Marina G. Kalyuzhnaya, Alexander S. Beliaev, Jin Wang
Bacterial Community Modeling Allows Metabolic Differentiation of Recurrent and Nonrecurrent Clostridioides Difficile Infections in the Human Gut
Michael A. Henson
Engineering a Microbiome Malathion Sensor Using Data-Driven Approaches
Aqib Hasnain, Enoch Yeung
Multi-Species Co-Culture Platform to Enable Spatial Analysis of Microbial Communication
Christopher A. Vaiana, Hyungseok Kim, Cullen R. Buie, Xavier Mayali, Jeffrey A. Kimbrel
Detecting Changes in Theâ C. Elegansâ digestive Tract Using an Engineered Bacterial Biosensor
Jack Rutter, Tanel Ozdemir, Chris P. Barnes, Leonor Quintaneiro, Luca Rosa, Filipe Cabreiro, Geraint Thomas, Evgeny Galimov
Investigating the Dynamics of Microbial Consortia in Spatially Structured Environments
Sonali Gupta, Marcella M. Gomez, Philip A. Romero, Ophelia Venturelli
High-Throughput Characterization of Host-Bacteriophage Interactions with an Eye Towards Emerging Pathogenic Threats
Benjamin A. Adler, Crystal Y. Zhong, Adam M. Deutschbauer, Vivek K. Mutalik, Adam P. Arkin
Optimisation of a Whole Cell Bacterial Biosensor for Propionate
Linda Dekker, Tanel Ozdemir, Chris P. Barnes
On the Adaptation and Evolution of Sulfonamide-Subsisting Bacteria
Yu Deng, Tong Zhang
Anaerobic Microbial Consortia Omics to Design Agile and Expedient Bioreactors
Matthew Perisin, Dagmar Leary, Marcus Benyamin, Nathan Schwalm, Rebecca Renberg, Elliot Gerlach, Wais Mojadedi, Sanchao Liu, Christian Sund, Akingbade Katherine