5th Conference on Constraint-Based Reconstruction and Analysis (COBRA 2018)

Session: Methods & Software 2

Presentations

04:00 PM

An Ecology of Modeling Methods, Data, and Tools to Decipher Functional Delegation and Species Interactions within a Microbiome

Christopher S. Henry, Pamela Weisenhorn, Daniel van der Lelie, James G. Jeffryes, Dylan C. Chivian, José P. Faria, Janaka N Edirisinghe, Filipe Liu, Samuel M.D. Seaver, Harry Dudley, Qizhi Zhang, Boris Sadkhin, Nidhi Gupta, Tian Gu, Ronald C. Taylor, Hyun-Seob Song, Hans C. Bernstein, Jeremy Zucker, Stephen R. Lindemann, Jack Gilbert, Robert Cottingham, Adam Arkin

04:25 PM

Thermodynamic Framework for Mutant Phenotype Prediction

Tolutola Oyetunde, Yinjie J. Tang

04:50 PM

Dynamic FBA with Global Constraints on Cellular Protein Fraction

Emil Karlsen, Eivind Almaas, Christian Schulz, Nikolay Martyushenko

05:15 PM

Incorporating Flux Sampling into a Minimal Assumption Dynamic Flux Balance Analysis Algorithm

St. Elmo Wilken, Michelle O'Malley, Linda Petzold

05:40 PM

Creation and Analysis of Biochemical Constraint-Based Models: The Cobra Toolbox v3.0

Ronan M.T. Fleming

06:05 PM

Memote: A Community Driven Effort Towards a Standardized Genome-Scale Metabolic Model Test Suite

Christian Lieven, Moritz E. Beber, Brett G. Olivier, Frank T. Bergmann, Nikolaus Sonnenschein