Arkin, A. P.

Authored

A Bacterial Sensor Taxonomy across Earth Ecosystems for Machine Learning Applications
6th International Conference on Microbiome Engineering
Optimal Production Level of Antibiotics in a Competitive Community
6th International Conference on Microbiome Engineering
Towards understanding and designing interactions among critical community members for persistence, activity and protection
6th International Conference on Microbiome Engineering
Predicting Bacteriophage Susceptibility from Escherichia coli genotype
6th International Conference on Microbiome Engineering
(2li) Utilizing Microbial Communities for Valorization of Waste Carbon
2023 AIChE Annual Meeting (ISBN: 978-0-8169-1120-2)
(110d) Assaying for Realized Niche Expansion in Stressed Environments with Synthetic Microbial Communities
2023 AIChE Annual Meeting (ISBN: 978-0-8169-1120-2)
(483g) An End-to-End Design and System Integration for Biomanufacturing on Mars Under Uncertainty
2022 Annual Meeting (ISBN: 978-0-8169-1118-9)
(22d) Characterization of Microbial Interactions in Stressed Environments for Construction of Synthetic Communities
2022 Annual Meeting (ISBN: 978-0-8169-1118-9)
Microbiome Interaction Network Toplologies to Improve Probiotic Ingress, Colonization, and Persistence across Varied Resident Communities
4th International Conference on Microbiome Engineering (ICME)
(436b) A Systems Engineering Approach to Biomanufacturing for Long-Duration Missions on Mars
2020 Virtual AIChE Annual Meeting (ISBN: 978-0-8169-1114-1)
(330d) Revealing Genetic Functions during Bacterial Adhesion and Biofilm Formation Using Barcode Transposon Mutant Library
2020 Virtual AIChE Annual Meeting (ISBN: 978-0-8169-1114-1)
(513cv) Prospects for Engineering High-Rate Microbial Electrosynthesis Driven By Direct Electron Uptake
2020 Virtual AIChE Annual Meeting (ISBN: 978-0-8169-1114-1)
(177e) Deep Learning for Probabilistic Uncertainty Quantification of an Integrated Biomanufacturing System for Martian Colonization
2020 Virtual AIChE Annual Meeting (ISBN: 978-0-8169-1114-1)
(224a) Data-Efficient Probabilistic Model Learning with Embedded High-Fidelity Knowledge for Biomanufacturing in Deep Space Manned Missions
2020 Virtual AIChE Annual Meeting (ISBN: 978-0-8169-1114-1)
High-Throughput Characterization of Host-Bacteriophage Interactions with an Eye Towards Emerging Pathogenic Threats
2nd International Conference on Microbiome Engineering (ICME 19)
(29h) Modeling and Uncertainty Analysis of Microbial Electrosynthesis of Acetate for Martian Colonization
2019 AIChE Annual Meeting (ISBN: 978-0-8169-1112-7)
(674g) Development and Application of Integrated Pipeline for the Modeling and Analysis of Microbial Communities in the Doe Systems Biology Knowledgebase
2017 Annual Meeting (ISBN: 978-0-8169-1102-8)
(116b) Systematic Analysis of Host – Genetic Circuit Interaction Reveals Host-Specific Epistatic Effects On Gene Expression in E. Coli
2012 AIChE Annual Meeting
Expression Mutant Screening for Improved Benzylisoquinoline Production in Yeast 
2016 Synthetic Biology: Engineering, Evolution & Design (SEED)
(345f) Stochastic Gene Expression in a Lentiviral Positive Feedback Loop: HIV-1 Tat Fluctuations Drive Phenotypic Diversity
2005 Annual Meeting
In-­‐Situ Resource Utilization on Manned Martian Missions Using Synthetic Biology
2014 Synthetic Biology: Engineering, Evolution & Design (SEED)
(151d) Using Mutual Information to Identify TAR-Tat Coevolution in HIV-1 and Its Implications for Viral Latency
2009 Annual Meeting
Programming the Timing of Gene Expression in Synthetic Circuits
2016 Synthetic Biology: Engineering, Evolution & Design (SEED)
High-Throughput Crispri Studies of Gene Function and Regulation in E. coli
2014 Synthetic Biology: Engineering, Evolution & Design (SEED)
Reverse-Engineering Human Gut Microbiome Synthetic Ecologies
2016 Synthetic Biology: Engineering, Evolution & Design (SEED)
(383d) Tat-Regulated Promoter Occupancy Mediates Open Loop Stochastic Bimodality In HIV1 Gene Expression And Latency
2007 Annual Meeting
Optimization of Cellular Resource Allocation Using Global mRNA Decay
2015 Synthetic Biology: Engineering, Evolution & Design (SEED)

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