2022 Annual Meeting

Session: Computational and systems biology tools for metabolic engineering and cell characterization

Chair

Thyer, R., University of Texas at Austin

Co-Chairs

Varman, A. M., Arizona State University
Trinh, C., University of Tennessee Knoxville

Presentations

12:30 PM

(120a) Are Genome Scale Metabolic Models (GeMs) Fit for Purpose? A Comprehensive Analysis into the Reliability of Chinese Hamster Ovary (CHO) Cell GeMs.
Strain, B., Kontoravdi, C., Morrissey, J.

12:48 PM

(120b) Quantification of Metabolic Differences in Platelets Exposed to Estrogen Using Flux Balance Analysis
Siska, S., Sake, C., Metcalf, A., Boyle, N., Neeves, K. B.

01:06 PM

(120c) Metabolic Modeling of Eicosapentaenoic Acid (EPA) and Arachidonic Acid (AA) Fatty Acids Using a Cybernetic Framework
Khanum, S., Gupta, S., Maurya, M., Raja, R., Aboulmouna, L., Subramaniam, S., Ramkrishna, D., Mohammed, N.

01:24 PM

(120d) Design of Diverse, Functional Mitochondrial Targeting Sequences across Eukaryotic Organisms Using Variational Autoencoders
Boob, A., Zhao, H., Zaidi, A., Singh, N., Xue, X., Chen, L. Q.

01:42 PM

(120e) Next-Flux (Neural-net EXtracellular Trained Flux)
Morrissey, J., Strain, B., Kontoravdi, C., Facco, P., Barberi, G.

02:00 PM

(120f) Dgpredictor: Automated Fragmentation Method for Gibbs Energy Change Prediction of Metabolic Reaction and De Novo Pathway Design
Upadhyay, V., Maranas, C. D.

02:18 PM

(120g) Multidimensional Resource Allocation Predicts Contrarian Reverse Diauxie Phenotype in Pseudomonas Aeruginosa
Carlson, R. P., McGill, S. L., Yung, Y., Hunt, K. A., Hanley, L.