2021 Annual Meeting

Session: Systems and Quantitative Biology: Metabolic Modeling

Chair

Christopher Kieslich, Auburn University

Co-Chair

Benjamin Woolston, Northeastern University

Presentations

08:00 AM

(591a) Towards Cybernetic Modeling of Biological Processes in Mammalian Systems—Lipid Metabolism in the Murine Macrophage
Lina Aboulmouna, Rubesh Raja, Sana Khanum, Shakti Gupta, Mano Maurya, Shankar Subramaniam, Doraiswami Ramkrishna

08:18 AM

(591b) Omics-Informed Metabolic Modeling Identifies Regulatory Mechanisms in Staphylococcus Aureus mutants
Rajib Saha, Vinai Chittezham Thomas, Mohammad Mazharul Islam

08:36 AM

(591c) Dynamic Genome-Scale Metabolic Modeling Suggests the Establishment of Mutualism without Co-Evolution within a Synthetic Microbiome
Kiumars Badr, Q. Peter He, Jin Wang

08:54 AM

(591d) Modeling Metabolic Networks Using Graph Neural Networks
Shekhar Mishra, Ziyu Wang, Huimin Zhao

09:12 AM

(591e) Using Genome-Scale Metabolic Models and Machine Learning to Design Condition-Specific Combination Therapies
Carolina Chung, Harkirat Singh Arora, Sriram Chandrasekaran

09:30 AM

(591f) Modeling Inflammatory Lipid Dynamics Using a Cybernetic Framework and Information-Theoretic Approaches
Sana Khanum, Lina Aboulmouna, Rubesh Raja, Mano Maurya, Shakti Gupta, Doraiswami Ramkrishna, Shankar Subramaniam, Mohsen Heidari Khoozani

09:48 AM

(591g) Introducing New Approaches to Gapfilling and Dynamic Flux Balances Analysis for Genome-Scale Models
Rajib Saha