2021 Annual Meeting
(364g) Combining Molecular Dynamics Simulations and Active Learning to Study the Hydrophobicity of Chemically Heterogeneous Surfaces
Authors
In this work, we present a hierarchical active learning approach to efficiently study the effect of patterning of polar and nonpolar groups on the hydrophobicity of self-assembled monolayers (SAMs). We employ atomistic molecular dynamics simulations and indirect umbrella sampling (INDUS) to label each chemically heterogeneous SAM with a hydration free energy (HFE). We then combine INDUS simulations and 3D Convolutional Neural Networks (CNNs) in an active learning framework. The active learning framework uses a Gaussian Process Regression model to predict the HFE of a SAM and an associated uncertainty in the HFE prediction based on the pattern of polar and nonpolar groups embedded on the SAM. The active learning model combines the labels and their associated uncertainty into an acquisition function which is designed to efficiently explore regions of pattern space with high uncertainty and find patterns which show large deviations from ideal behavior. Using the hierarchical active learning approach, we explore the relationship between patterning and hydrophobicity and recreate an âenvelopeâ of HFEs associated with various mole fractions of the polar component. We also identify patterns with large positive and negative deviations from a linear combination of HFEs at the given mole fraction. Comparison of the HFE envelope for different polar end groups further reveals how deviations from a linear combination of HFEs depend on the end group chemistry. Finally, we analyze structural metrics of interfacial water near the SAM surface to understand how chemical context plays a role in determining hydrophobicity and why some motifs on patterned SAMs are more hydrophobic than others.