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Publications
Proceedings
2020 Virtual AIChE Annual Meeting
Computational Molecular Science and Engineering Forum
Poster Session: Computational Molecular Science and Engineering Forum (CoMSEF)
2020 Virtual AIChE Annual Meeting
Session: Poster Session: Computational Molecular Science and Engineering Forum (CoMSEF)
Chair
Sarupria, S.
, University of Minnesota, Twin Cities
Co-Chair
Colón, Y.
Presentations
08:00 AM
(346bk) Differential Gene Set Enrichment Analysis: A Statistical Approach to Quantify the Relative Enrichment of Two Gene Sets
Joly, J.
,
Graham, N.
,
Lowry, W. E.
(346bs) Structure/Dynamics of Electrolyte at Various Graphitic Electrode Interfaces
Rustam, S.
,
Pfaendtner, J.
(346q) Discovery of Self-Assembling ?-Conjugated Peptides By Active Learning-Directed Coarse-Grained Molecular Simulation
Shmilovich, K.
,
Ferguson, A.
,
Sidky, H.
,
Mansbach, R. A.
,
Panda, S. S.
,
Tovar, J. D.
,
Dunne, O. E.
(346al) Molecular Weight Transferable Electronic Structure Prediction for Coarse-Grained Polymers
Jackson, N.
,
De Pablo, J.
(346ag) Computational Modeling to Understand the Spatiotemporal Cholinergic Modulation of Hippocampal Synaptic Plasticity
Branen, A.
,
Kumar, G.
(346bm) Prediction of Solvation Free Energies Using PC-SAFT Classical Density Functional Theory
Gross, J.
,
Eller, J.
(346bq) Brownian Dynamics Simulations of Colloidal Sheets in Shear Flow
Silmore, K.
,
Strano, M.
,
Swan, J.
(346az) Utilizing Parallel Biasing Methods to Understand Host-Guest Systems
Leonhard, A.
,
Whitmer, J.
(346y) Introduction of Alchemical Variables in Metadynamics to Enhance Configurational Sampling
Hsu, W. T.
,
Shirts, M.
,
Merz, P.
,
Bussi, G.
(346ak) General-Purpose Coarse-Grained Toughened Thermoset Model for Aerospace Composites: Workflows, Parameterization, and Validation
Henry, M.
,
Thomas, S.
,
Bates, J.
,
Farmer, B.
,
Reynolds, C.
,
Lanier, A.
,
Wiggins, J.
,
Jankowski, E.
(346ay) How Can Machine Learning Accelerate the Sampling and Interpretation of Molecular Dynamics Simulations?
Feng, J.
,
Selvam, B.
,
Shukla, D.
(346be) CG Pyrosetta: A Coarse-Grained Configurational Search Tool for General Heteropolymers
Fobe, T.
,
Shirts, M.
(346bg) Gmso: A Flexible, Python-Based Representation of Chemical Topologies for Molecular Simulation
Quach, C. D.
,
Thompson, M. W.
,
Timalsina, U.
,
Gilmer, J.
,
Matsumoto, R.
,
Shamaprasad, P.
,
Bansal, A.
,
Iacovella, C.
,
McCabe, C.
,
Cummings, P.
(346bh) Exact Sampling of Stochastic Process from Brownian Bridge
Wang, S.
,
Ramkrishna, D.
,
Narsimhan, V.
(346bu) Understanding the Homogeneous Ice Nucleation Process for Different Ice Polymorphs
Bechelli, S.
,
Delhommelle, J.
,
Jain, K.
(346bo) Prediction of Structure and Charge Transport in Itic-Derived Electron Acceptors for Plastic Solar Cells
Klopfenstein, M.
,
Cecily, M.
,
Schwindt, N.
,
Miller, E.
,
Jones, M.
,
Jankowski, E.
(346w) Generating Potential Energy Landscapes for Membrane Proteins Using High-Throughput Simulations
Rajagopal, N.
,
Nangia, S.
(346at) Combining Neural Network Adsorption Predictions with Free Energy Calculations: A New Framework for Computational MOF Discovery for Chemical Separations
Anderson, R.
,
Gomez Gualdron, D.
(346aa) Transition Path Sampling Simulations of Base Flipping in RNA
Levintov, L.
,
Vashisth, H.
(346r) Discovery of Chemical Descriptors/Features in Predicting Protein-Ligand Binding Properties Using 3D Convolutional Neural Network
Ashraf, C.
,
Beck, D.
,
Pfaendtner, J.
(346as) Simulation Workflows for Studying Adsorption and Transport at Patterned M1 Catalyst Surfaces
Jones, C.
,
Anderson, B. H.
,
Fothergill, J.
,
Jankowski, E.
(346af) Machine Learning the Fundamental Tradeoffs between Conductivity and Voltage Stability in Solid State Electrolytes
Rao, K. K.
,
Nikolaou, M.
,
Yao, Y.
,
Grabow, L.
(346bt) Utilizing Molecular Dynamics Simulations to Predict the Modulation of Interfacial Hydrophobicity By Chemical and Physical Properties
Dallin, B. C.
,
Van Lehn, R.
(346ap) All-Atom Molecular Dynamics Study for O2 Permeation in a Nafion Polyelectrolyte Membrane
Tiwari, N.
,
Ethirajan, S. K.
,
Ulissi, Z.
(346br) Investigating the Correlated Dynamics of Aqueous Solutions through Van Hove Functions: Insights from Molecular Simulation
Matsumoto, R.
,
Thompson, M.
,
Cummings, P.
,
Vuong, V. Q.
,
Zhang, W.
,
Irle, S.
,
van Duin, A.
,
Kent, P. R. C.
(346ab) Mechanism of Inorganic Phosphate Release from Actin Subunits
Mani, S.
,
Katkar, H. H.
,
Voth, G. A.
(346s) Hierarchical Assembly of Peptoids into Complex Nanostructures
Alamdari, S.
,
Pfaendtner, J.
(346ac) Machine Learning and Computational Simulation Aided Design of Antibacterial Oligothioetheramides
Clancy, P.
,
Sharma, D.
(346bl) Understanding the Chemical Machine Learning Design Space Using a Property Graph Database
Luxon, A.
,
Le, Q.
,
Ferri, J. K.
,
McQuade, T.
(346bd) Development of a Novel Method for Upscaling Molecular Dynamics to Coarse-Grained Models
McConnell, J.
,
Rao, Q.
,
Li, J.
,
Xia, Y.
,
Sutherland, J. C.
(346o) Microscopic and Machine Learning Modeling of Film Growth in Plasma Enhanced Atomic Layer Deposition
Ding, Y.
,
Zhang, Y.
,
Christofides, P.
(346c) Exploring Metal-Support Interactions in Catalysis with Statistical Learning
Liu, C. Y.
,
Zhang, S.
,
Martinez, D.
,
Li, M.
,
Senftle, T.
(346k) Leveraging Quantum-Chemical Screening Methods to Guide the Discovery of Promising Metal?Organic Frameworks
Rosen, A. S.
,
Mian, M. R.
,
Islamoglu, T.
,
Iyer, S.
,
Chen, H.
,
Farha, O. K.
,
Notestein, J.
,
Snurr, R.
(346g) Understanding the Role of Alkali Metals to Promote Pure Nickel and Bimetallic Nickel-Copper Catalysts for Dry Reforming of Methane
Khan, M. A.
,
Yoon, S. H.
,
Ghouri, M. M.
,
Elbashir, N.
(346bp) Molecular Simulation Studies of Solvent-in-Salt Electrolytes for Energy Storage Applications
Matsumoto, R.
,
Thompson, M.
,
Popov, I.
,
Sacci, R.
,
Sanders, N.
,
Osti, N. C.
,
Kobayashi, T.
,
Mamontov, E.
,
Pruski, M.
,
Sokolov, A.
,
Cummings, P.
(346aq) Topological Data Analysis: Applications to Soft Matter and Molecular Simulations
Smith, A.
,
Chew, A. K.
,
Van Lehn, R.
,
Abbott, N. L.
,
Zavala, V. M.
(346h) Nitrogen Electroreduction: Elementary Kinetic Analysis and Surface Functionalization for Improved Catalysis
Maheshwari, S.
,
Li, Y.
,
Rostamikia, G.
,
Janik, M.
(346bf) Combining Strategic Training Data Selection and Feature Engineering to Reach Accurate and Efficient Molecular Property Prediction
Li, B.
,
Rangarajan, S.
(346ae) Utilization of Molecular Dynamics to Predict Glass Transition Temperatures of Imidazolium-Based Ionic Liquids and Their Mixtures
Gliege, M. E.
,
Lin, W. J.
,
Davis, V.
,
Dai, L. L.
,
Xu, Y.
(346au) Machine Learning Using the Guest/Host Energy Histogram to Predict the Adsorption of Chain Molecules
Li, Z.
,
Bucior, B.
,
Snurr, R.
(346ar) Evaluating the Adsorption Landscape for Polymers of Intrinsic Microporosity
Anstine, D.
,
Tang, D.
,
Sholl, D.
,
Colina, C.
(346an) Multiscale Computational Study of Continuous Manufacturing of Polymeric Micelle Based Nanocarriers
Duran, T.
,
Costa, A.
,
Xu, X.
,
Burgess, D.
,
Chaudhuri, B.
(346i) Predicting an Optimal Oxide/Metal Interface Catalyst for Hydrodeoxygenation Chemistry of Biomass Derivatives
Medlin, J.
,
Nikolla, E.
,
Deo, S.
,
Janik, M.
(346m) Navigating Combinatorial Challenges in High-Throughput Transition Metal Complex Discovery
Arunachalam, N.
,
Nandy, A.
,
Duan, C.
,
Taylor, M.
,
Harper, D.
,
Kulik, H.
(346ao) Full-Atomistic Entangled Polymer Structure Generation Using Reverse-Mapping from Breads-Spring Models.
Nitta, H.
,
Ozawa, T.
(346bi) Data and Information Management for Pharma 4.0
Ruggles, A.
(346aw) GPU Optimized Monte Carlo Version 2.50
Nejahi, Y.
,
Soroush Barhaghi, M.
,
Schwing, G.
,
Schwiebert, L.
,
Potoff, J.
(346l) Theoretical Studies on Ag-Based Homolytic Bond Dissociation Energies
Wu, L.
,
Tang, S.
,
Zhou, S.
(346ad) Monomer-Based Kinetic Monte Carlo Simulation for Multifunctional Polymerization
Harmon, R.
,
Broadbelt, L.
,
Iedema, P.
(346bc) Parallel Prefetching in Canonical and Grand Canonical Ensemble Monte Carlo Simulations
Hatch, H.
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