2013 AIChE Annual Meeting

Session: In Silico Systems Biology: Cellular and Organismal Models II

A critical component of systems biology is the development of in silico approaches to understand systems of interest. Novel uses of in silico methods to understand biological systems, as well as the development of new technologies and algorithms for in silico systems analysis are examined.

Chair

Ryan S. Senger, Virginia Tech

Co-Chair

Jamey Young, Vanderbilt University

Presentations

03:15 PM

(547a) Towards a Whole-Cell Model of Escherichia Coli
Nicholas Ruggero, Derek Macklin, Elsa Birch, Markus W. Covert

03:33 PM

(547b) Large-Scale Reconstruction and Analysis of High Quality Core Metabolic Models for Over 8000 Microbial Genomes
Janaka N Edirisinghe, Neal Conrad, Paul Frybarger, Amina Shabbeer, Christopher S. Henry

03:51 PM

(547c) Constrictor: Flux Balance Analysis Constraint Modification Provides Insight for Design of Biochemical Networks
Anushree Chatterjee, Keesha Erickson

04:09 PM

(547d) In Silico Model-Based Cofactor Engineering for Strain Improvement
Meiyappan Lakshmanan, Bevan Chung, Chengcheng Liu, Dong-Yup Lee

04:27 PM

(547e) Using Hierarchical Modularity to Identify Substrate Cycles in Metabolic Networks
Gautham V. Sridharan, Ehsan Ullah, Soha Hassoun, Kyongbum Lee

04:45 PM

(547f) Computational Investigation of Photosynthetic Host Strains for Industrial Biotechnology
Kunal Mehta, James R. Swartz

05:03 PM

(547g) Comparative Modeling of Metabolism Across the Shewanella Genus
Wai Kit Ong, Trang T. Vu, Klaus Lovendahl, Jenna Llull, Jennifer L. Reed

05:21 PM

(547h) Towards Multi-Tissue Type Metabolic Modeling of Maize
Rajib Saha, Margaret Simons, Akhil Kumar, Lena?g Guillard, Bertrand Hirel, Costas D. Maranas