It is demonstrated that the modification of stone protective coating compositions with nanoparticles dramatically enhance the water and lipid repellent properties of the stone after treatment with the modified compositions. Thus, for a siloxane composition, the water - marble contact angle increased from 110o for unmodified composition to 160o for modified composition with nanoparticles. The increase in water contact angle depends on nanoparticle concentration and attain a maximum for concentrations > 0,5% (w/v). Microscopy (SEM and AFM), Raman spectroscopy, and Light Scattering data on surface morphology and nanoparticle characteristics are reported, which form the basis for a physico¬chemical explanation of the performance of the new coatings for the protection of stone and stone monuments.