2006 AIChE Annual Meeting

Session: In Silico Systems Biology II

A critical component of systems biology is the development of in silico approaches to understand systems of interest. For this session, papers discussing novel uses of in silico methods to understand biological systems, as well as the development of new technologies and algorithms for in silico systems analysis are welcome. Research including experimental work is particularly encouraged.

Chair

Varner, J. D., Cornell University

Co-Chair

Srivastava, R., University of Connecticut

Presentations

12:30 PM

(237a) In Silico Bacterial Cells: from Generalized Coarse-Grained to Genome-Specific Modular Models
Atlas, J., Nikolaev, E. V., Shuler, M.

12:50 PM

(237b) Bifurcation Analysis of Stochastic Gene Networks
Salis, H., Kaznessis, Y. N.

01:10 PM

(237c) Novel Framework for Identifying Objective Functions of Biological Systems
Gianchandani, E. P., Oberhardt, M. A., Lee, J. M., Papin, J.

01:30 PM

(237d) Modelling Amino Acid Metabolism in Mammalian Cells - Towards the Development of a Model Library
Kontoravdi, C., Lam, C. M. C., Lee, Y. Y., Wong, D. C. F., Yap, M. G. S., Pistikopoulos, E. N., Mantalaris, A.

02:00 PM

(237e) Cell-Cell Crosstalk Potentiates Cell Patterning during Development
Giurumescu, C., Sternberg, P. W., Asthagiri, A. R.

02:20 PM

(237f) Regulation of the Sh2 Domain-Containing Protein-Tyrosine Phosphatase Shp2 in Receptor Signaling: Kinetic Model and Structure-Based Analysis
Barua, D., Faeder, J. R., Haugh, J.

02:40 PM

(237g) Molecular Signatures That Differentiate Cancer Subtype and Predict Clinical Outcome
Price, N. D., Shmulevich, I., Lin, B., Zhang, W., Urban, N., Drescher, C., Rappaport, N.