2006 AIChE Annual Meeting

Session: Metabolic Engineering & Systems Biology Poster Session

One of 12 Group 15 poster sessions.

Chair

Co-Chair

Patrick C. Cirino, Pennsylvania State University

Presentations

(451ac) Development of a Database Tool for Novel Biosynthetic Pathway Design
Kristala Prather, Amanda Lanza, Wei Chan
(451aa) Significance Analysis of Time-Series High-Throughput Transcriptional Profiling Data: Applied to Arabidopsis Thaliana Liquid Cultures Subjected to Environmental Stresses
Bhaskar Dutta, Robert W. Snyder, Maria I. Klapa
(451e) Studying the Mechanism of Transcriptional Regulation of Mesenchymal Stem Cell Proliferation and Differentiation
Linxia Zhang, Tim Howes, Neil Wright, Christina Chan
(451ag) Sensitivity Analysis on Ms2 Viral Dynamics Using Interval Mathematics
Ozlem Yilmaz, Luke E. K. Achenie, Ranjan Srivastava
(451j) Combinatorial Engineering of Intergenic Regions to Tune Expression of Multiple Genes in Operons
Brian Pfleger, Doug Pitera, Christina Smolke, Jay Keasling
(451q) Regulating Phenotypic Variations Using Integrated Flux and Energy Balance Analysis Based Multiobjective Framework
Deepak Nagrath, Marco Avila, Francois Berthiaume, Martin L. Yarmush
(451s) Real-Time Detection of Tca Cycle Anaplerosis in Human Glioma Cells with 13c NMR Spectroscopy
Anthony Mancuso, Ralph J. Deberardinis, Craig B. Thompson
(451ad) Data Correction, Normalization and Validation for Enhanced Accuracy of Gc-MS Metabolomic Analysis: Time Series Metabolomic Analysis of Arabidopsis Thaliana Response to Elevated Co2 a Case Study
Harin H. Kanani, Maria I. Klapa
(451z) “Retrobiosyntethic” Design for the Microbial Production of an Organic Compound
Collin H. Martin, Kristala Prather
(451ai) A Metabolic Modeling Approach to Optimizing Recombinant Protein Production in L. Lactis Fermentations
Gian M. Oddone, David A. Mills, David E. Block
(451y) Biosynthesis of Lovastatin in a Heterologous Host
Suzanne M. Ma, Xinkai Xie, Wladyslaw A. Wojcicki, Yi Tang
(451b) Optimization of Stochastically-Simulated Gene Network Models
Jonathan R. Tomshine, Yiannis N. Kaznessis
(451al) Shotgun DNA Microarray-Based Transcriptional Analysis of the Clostridium Tyrobutyricum Wildtype and Mutants
Yali Zhang, Xiaoguang Liu, Shang-Tian Yang
(451r) Usefulness of Rnase III Cleavage Sites for Tuning Relative Gene Expression
Wesley D. Marner II, Brian Pfleger, Jay Keasling
(451h) Gene Expression Profiling of 3t3-L1 Adipocytes Expressing the Mitochondrial Uncoupling Protein 1
Fatih Senocak, Yaguang Si, Kyongbum Lee, Arul Jayaraman
(451n) Control of Cell Growth and Glucose Uptake Rates by Controlled Expression of Phosphofructokinase (Pfk) in B. Subtilis
Zhiwei Pan, Tao Zhu, Richard Koepsel, Michael M. Domach, Mohammad Ataai
(451t) Translational Coupling and Regulation in Prokaryotic Operons
Lon Chubiz, Christopher V. Rao
(451u) Quantifying the Metabolic Capabilities of Engineered Zymomonas Mobilis for Ethanol Production from Hexoses and Pentoses Using Linear Programming Analysis
Ivi C. Tsantili, M. Nazmul Karim, Maria I. Klapa
(451c) How External Electrical Stimuli Can Act at Cellular Level in an in Vitro Culture: Mathematical Model and Experimental Analysis
Marina Flaibani, Nicola Elvassore
(451x) Nuclear Receptors Based Modulation of Hepatic Lipid and Glucose Metabolism
Deepak Nagrath, Yoko Tanimura, Hongzhi Xu, Francois Berthiaume, Martin L. Yarmush
(451i) Complex Systems Analysis and Mathematical Modeling of Insulin Resistance in Skeletal Muscle Cells and the Impact of Plasma Free Fatty Acids
Baris U. Agar, Ali Cinar, Emmanuel C. Opara, Gary Reznik
(451ah) Computational and Recombination Based Methods for Directed Evolution
Bernard Loo, Anshul Dubey, Karen M. Polizzi, Javier Chaparro-Riggers, Andy Bommarius
(451d) A Quantitative Model of Error Accumulation during Pcr Amplification with Application to Gene Synthesis
Hendrik J. Viljoen, Elsje Pienaar, Theresa Schinko, Reingard Grabherr
(451ae) User-Controlled Changes in Fluorescence Distribution in Cells with Oscillatory Genetic Network Dynamics
Stephanie Portle, Ka-Yiu San, George N. Bennett, Nikolaos V. Mantzaris
(451an) Modeling of Glycolytic Pathway Using in Vitro Kinetics
Haluk Hamamci, Banu Ozturk-Temur, A. Palazoglu
(451aj) Design of Transient Isotopic Labeling Studies for the Experimental Measurement of Autotrophic Metabolic Fluxes
Avantika A. Shastri, John A. Morgan
(451k) Identification of Succinic Acid Tolerance Genes in E.Coli
Amarjeet Singh, Ryan T. Gill
(451am) An Age-Structured Model of Dendritic Cell Trafficking in the Lung
David Klinke
(451ak) The Bioactivity of Il-12: There's More to the Story Than P70 or P40
David Klinke
(451a) To Build a Microbial Factory: Investment Cost and Operating Cost Analysis of Metabolic Networks
Ross Carlson
(451w) Magnetically Driven Mixing within a Microarray Geometry Using Functionalized Magnetic Nanoparticles
Sandip Agarwal, Paul E. Laibinis
(451f) Reverse Engineering of an Erythromycin Overproducing Strain
Chinping Chng, Amy M. Lum, Jonathan Vroom, Camilla M. Kao
(451ab) Design of Isotope Labeling Experiments for Metabolic Flux Analysis in Escherichia Coli under Anaerobic Condition
Madhuresh Choudhary, Yandi Dharmadi, Ramon Gonzalez, Ka-Yiu San, Jacqueline V. Shanks
(451af) Escherichia Coli Autoinducer 2 Uptake Is Induced by Intracellular Factors Such as Luxs Transcription Rate but Not Necessarily by the Cell Density: Analysis of the Network Using Bifurcation Analysis and Stochastic Approach
Andres Fernando Gonzalez Barrios, Luke E. K. Achenie
(451o) Selections from Screens: a Novel Tool for the Selection of Overproducers
Michael D. Lynch, Tirzah Y. Mills, Ryan T. Gill
(451m) Optimal Combinatorial Library Design from a Computational Complexity Perspective
Wei Xie, Nikolaos Sahinidis
(451g) Simulation of Directed Evolution Experiments
Enrique Munoz, Michael W. Deem, K. Dane Wittrup
(451p) Setting up a High Throughput Screening Facility as Part of the Academic Experience
Parag P. Shah, Scott L. Diamond
(451l) Genome-Wide Transcriptional Response of Staphylococcus Aureus to Hypochlorite-Induced Oxidative Stress
Wook Chang, Freshteh Toghrol, William E. Bentley
(451v) Genomic-Based Identification of the Sporulation Restoring Gene in Degenerate Clostridium Acetobutylicum Strains
Bryan P. Tracy, Eleftherios T. Papoutsakis