2005 Annual Meeting

Session: Computational Biology: Part III

Co-Chair

Louis A. Clark, Biogen Idec

Presentations

08:00 AM

(456a) Antibody Affinity Maturation Using Computational Protein Design
Shaun M. Lippow, K. Dane Wittrup, Bruce Tidor

08:18 AM

(456b) Ipro: Iterative Protein Redesign and Optimization Procedure: Application to Three Case-Studies
Manish C. Saraf, Brian A. Canada

08:36 AM

(456c) An Informatics Analysis of the in Vivo Affinity Maturation Process -- Learning from Nature's Evolution of Protein-Protein Interfaces
Louis A. Clark, Herman Van Vlijmen

08:54 AM

(456d) Characterization of Protein Sequence Landscapes Using Flat-Histogram Monte Carlo Algorithms
Pablo Debenedetti, Athanassios Z. Panagiotopoulos

09:12 AM

(456e) Atomic Molecular Dynamical Modeling of a Large Protein Complex: Stf-Fviia
Coray M. Colina, Robert E. Duke, Divi Venkateswarlu, Lalith Perera, Tom Darden, Lee G. Pedersen

09:30 AM

(456f) Unfolding a Linker between Helical Repeats
Vanessa Ortiz, Steven O. Nielsen, Michael L. Klein, Dennis E. Discher

09:48 AM

(456g) Molecules Losing Space: an Entropy Calculation of Ache-Fas2 Association
Tushar Jain, David Minh, J. Andrew McCammon

10:06 AM

(456h) Visualization and Characterization of Protein Conformational Space Via Geometric Techniques
Pramod P. Wangikar, Ashish Tendulkar, Babatunde A. Ogunnaike